SRR387895 (PRJNA149975)

Processing Status: Completed

General Details

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Sample Name GSM843771
Organism Saccharomyces cerevisiae
Release Date 1/2012

Sample Links

Run Details

Spots 6461106
Total Bases 258444240
Total Bases 258444240

Repository Details

SRA SRR387895
ENA SRR387895
BioProject PRJNA149975

Experiment Details

Title footprints for the 12 timepoint of the ndt80 release timecourse (the first lane of this)

Sample Details

Run Accession SRR387895
Total Number Of Spots (Original File)) 6461106
Total Number Of Bases (Original File) 258444240
Average Read Length 40
Original File Size (Mb) 184
Experiment Id SRX110573
Library Name GSM843771: footprints for the 12 timepoint of the ndt80 release timecourse (the first lane of this)
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009639
Pubmed Id 22194413
Sample SRS281791
Biosample SAMN00761953
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM843771
Center Name GEO
Submission SRA048501
Month 1
Year 2012
Author Brar
Sample Source S. cerevisiae sporulation media
Sample Title footprints for the 12 timepoint of the ndt80 release timecourse (the first lane of this)
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Cell-Line SK1
Strain SK1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR387895 Saccharomyces cerevisiae S. cerevisiae sporulation media SK1 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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