SRR387896 (PRJNA149975)

Processing Status: Completed

General Details

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Sample Name GSM843772
Organism Saccharomyces cerevisiae
Release Date 1/2012

Sample Links

Run Details

Spots 18590410
Total Bases 743616400
Total Bases 743616400

Repository Details

SRA SRR387896
ENA SRR387896
BioProject PRJNA149975

Experiment Details

Title footprints for the 12 timepoint of the ndt80 release timecourse (the second lane of this)

Sample Details

Run Accession SRR387896
Total Number Of Spots (Original File)) 18590410
Total Number Of Bases (Original File) 743616400
Average Read Length 40
Original File Size (Mb) 396
Experiment Id SRX110574
Library Name GSM843772: footprints for the 12 timepoint of the ndt80 release timecourse (the second lane of this)
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009639
Pubmed Id 22194413
Sample SRS281792
Biosample SAMN00761954
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM843772
Center Name GEO
Submission SRA048501
Month 1
Year 2012
Author Brar
Sample Source S. cerevisiae sporulation media
Sample Title footprints for the 12 timepoint of the ndt80 release timecourse (the second lane of this)
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Cell-Line SK1
Strain SK1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR387896 Saccharomyces cerevisiae S. cerevisiae sporulation media SK1 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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