SRR403887 (PRJNA152347)

Processing Status: Completed

General Details

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Sample Name GSM869041
Organism Homo sapiens
Release Date 2/2012

Sample Links

Run Details

Spots 19706845
Total Bases 788273800
Total Bases 788273800

Repository Details

SRA SRR403887
ENA SRR403887
BioProject PRJNA152347

Experiment Details

Title Footprint for PP242 treated PC3 cells, replicate #1.

Sample Details

Run Accession SRR403887
Total Number Of Spots (Original File)) 19706845
Total Number Of Bases (Original File) 788273800
Average Read Length 40
Original File Size (Mb) 466
Experiment Id SRX118290
Library Name GSM869041: Footprint for PP242 treated PC3 cells, replicate #1.
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010679
Pubmed Id 22367541
Sample SRS290859
Biosample SAMN00779922
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM869041
Center Name GEO
Submission SRA049772
Month 2
Year 2012
Author Hsieh
Sample Source PC3 human prostate cancer cells
Sample Title Footprint for PP242 treated PC3 cells, replicate #1.
Library-Type Ribo-Seq
Condition Test
Tissue Prostate
Cell-Line PC3
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR403887 Homo sapiens PC3 human prostate cancer cells PC3 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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