SRR403893 (PRJNA152347)

Processing Status: Completed

General Details

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Sample Name GSM869047
Organism Homo sapiens
Release Date 2/2012

Sample Links

Run Details

Spots 25291675
Total Bases 1011667000
Total Bases 1011667000

Repository Details

SRA SRR403893
ENA SRR403893
BioProject PRJNA152347

Experiment Details

Title Footprint for PP242 treated PC3 cells, replicate #2.

Sample Details

Run Accession SRR403893
Total Number Of Spots (Original File)) 25291675
Total Number Of Bases (Original File) 1011667000
Average Read Length 40
Original File Size (Mb) 652
Experiment Id SRX118296
Library Name GSM869047: Footprint for PP242 treated PC3 cells, replicate #2.
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010679
Pubmed Id 22367541
Sample SRS290865
Biosample SAMN00779928
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM869047
Center Name GEO
Submission SRA049772
Month 2
Year 2012
Author Hsieh
Sample Source PC3 human prostate cancer cells
Sample Title Footprint for PP242 treated PC3 cells, replicate #2.
Library-Type Ribo-Seq
Condition Test
Tissue Prostate
Cell-Line PC3
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR403893 Homo sapiens PC3 human prostate cancer cells PC3 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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