SRR5453819 (PRJNA297039)
General Details
| Sample Name | GSM2579679 |
|---|---|
| Organism | Mus musculus |
| Release Date | 6/2017 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| View Custom Track |
Run Details
| Spots | 110026413 |
|---|---|
| Total Bases | 9462271518 |
| Total Bases | 9462271518 |
Repository Details
| SRA | SRR5453819 |
|---|---|
| ENA | SRR5453819 |
| BioProject | PRJNA297039 |
Experiment Details
| Title | Total Ribo-Seq (RPL22-3xHA cells)_rep1 |
|---|
Sample Details
| Run Accession | SRR5453819 |
|---|---|
| Total Number Of Spots (Original File)) | 110026413 |
| Total Number Of Bases (Original File) | 9462271518 |
| Average Read Length | 86 |
| Original File Size (Mb) | 3803 |
| Experiment Id | SRX2741985 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP064202 |
| Pubmed Id | 28625553 |
| Sample | SRS2128586 |
| Biosample | SAMN06759988 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM2579679 |
| Center Name | GEO |
| Submission | SRA301032 |
| Month | 6 |
| Year | 2017 |
| Author | Shi |
| Sample Source | Embryonic stem cells (ESCs) |
| Sample Title | Total Ribo-Seq (RPL22-3xHA cells)_rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Tissue | Embryo |
| Cell-Line | E14 |
| Genotype | Bearing 1 allele of Rpl22-3xHA at endogeneous locus |
| Antibody Used | anti-HA antibody (Abcam , catalog # ab9110) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5453819 | Mus musculus | Embryonic stem cells (ESCs) | E14 | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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