SRR5453820 (PRJNA297039)

General Details

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Sample Name GSM2579680
Organism Mus musculus
Release Date 6/2017

Sample Links

Run Details

Spots 124471436
Total Bases 10704543496
Total Bases 10704543496

Repository Details

SRA SRR5453820
ENA SRR5453820
BioProject PRJNA297039

Experiment Details

Title Total Ribo-Seq (RPL22-3xHA cells)_rep2

Sample Details

Run Accession SRR5453820
Total Number Of Spots (Original File)) 124471436
Total Number Of Bases (Original File) 10704543496
Average Read Length 86
Original File Size (Mb) 4317
Experiment Id SRX2741986
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP064202
Pubmed Id 28625553
Sample SRS2128587
Biosample SAMN06759987
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM2579680
Center Name GEO
Submission SRA301032
Month 6
Year 2017
Author Shi
Sample Source Embryonic stem cells (ESCs)
Sample Title Total Ribo-Seq (RPL22-3xHA cells)_rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Embryo
Cell-Line E14
Genotype Bearing 1 allele of Rpl22-3xHA at endogeneous locus
Antibody Used anti-HA antibody (Abcam , catalog # ab9110)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5453820 Mus musculus Embryonic stem cells (ESCs) E14 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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