SRR5886321 (PRJNA396698)
Processing Status: Completed
General Details
| Sample Name | GSM2724038 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 11/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 89601931 |
|---|---|
| Total Bases | 6809746756 |
| Total Bases | 6809746756 |
Repository Details
| SRA | SRR5886321 |
|---|---|
| ENA | SRR5886321 |
| BioProject | PRJNA396698 |
Experiment Details
| Title | NAT10_KO_Ribo-seq_BioRep_1 (protected RNA) |
|---|
Sample Details
| Run Accession | SRR5886321 |
|---|---|
| Total Number Of Spots (Original File)) | 89601931 |
| Total Number Of Bases (Original File) | 6809746756 |
| Average Read Length | 76 |
| Original File Size (Mb) | 2338 |
| Experiment Id | SRX3052238 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP114504 |
| Pubmed Id | 30449621 |
| Sample | SRS2398666 |
| Biosample | SAMN07431143 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM2724038 |
| Center Name | GEO |
| Submission | SRA595098 |
| Month | 11 |
| Year | 2018 |
| Author | Arango |
| Sample Source | HeLa cells, Ribosome Protected RNA |
| Sample Title | NAT10_KO_Ribo-seq_BioRep_1 (protected RNA) |
| Library-Type | Ribo-Seq |
| Condition | KO |
| Sex | female |
| Genotype | WT |
| Antibody Used | anti-ac4C (Abcam, lot#H09131602) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5886321 | Homo sapiens | HeLa cells, Ribosome Protected RNA | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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