SRR8135339 (PRJNA501872)

General Details

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Sample Name GSM3450420
Organism Homo sapiens
Release Date 2/2019

Sample Links

Run Details

Spots 16323567
Total Bases 816178350
Total Bases 816178350

Repository Details

SRA SRR8135339
ENA SRR8135339
BioProject PRJNA501872

Experiment Details

Title HepG2 shCtrl Ribo rep2 (Ribo-seq)

Sample Details

Run Accession SRR8135339
Total Number Of Spots (Original File)) 16323567
Total Number Of Bases (Original File) 816178350
Average Read Length 50
Original File Size (Mb) 270
Experiment Id SRX4956359
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP167238
Pubmed Id 30867593
Sample SRS3997281
Biosample SAMN10347826
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3450420
Center Name GEO
Submission SRA800748
Month 2
Year 2019
Author Huang
Sample Source HepG2 cells
Sample Title HepG2 shCtrl Ribo rep2 (Ribo-seq)
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Inhibitor Cycloheximide
Tissue Liver
Cell-Line HepG2
Cellular-Compartment input
Shrna shMETTL14
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8135339 Homo sapiens HepG2 cells HepG2 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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