Huang et al. 2019 (PRJNA501872)
General Details
| Title | Active ribosome profiling in SETD2 or METTL14 knockdown HepG2 cells |
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| Organism | |
| Number of Samples | 24 |
| Release Date | 2018/10/29 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
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Repository Details
| SRA | SRP167238 |
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| ENA | SRP167238 |
| GEO | GSE121952 |
| BioProject | PRJNA501872 |
Publication
| Title | |
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| Authors | Huang H,Weng H,Zhou K,Wu T,Zhao BS,Sun M,Chen Z,Deng X,Xiao G,Auer F,Klemm L,Wu H,Zuo Z,Qin X,Dong Y,Zhou Y,Qin H,Tao S,Du J,Liu J,Lu Z,Yin H,Mesquita A,Yuan CL,Hu YC,Sun W,Su R,Dong L,Shen C,Li C,Qing Y,Jiang X,Wu X,Sun M,Guan JL,Qu L,Wei M,Müschen M,Huang G,He C,Yang J,Chen J |
| Journal | Nature |
| Publication Date | 2019 Mar |
| Abstract | |
| PMC | PMC6438714 |
| PMID | 30867593 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR8135324 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide |  |
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| SRR8135325 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135326 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135327 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135328 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135329 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135330 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135331 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135332 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135333 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135334 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135335 | PRJNA501872 | Homo sapiens | HepG2 | RNA-Seq | Cycloheximide | |
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| SRR8135336 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135337 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135338 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135339 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135340 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135341 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135342 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135343 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135344 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135345 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135346 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| SRR8135347 | PRJNA501872 | Homo sapiens | HepG2 | Ribo-Seq | Cycloheximide | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About