SRR8135347 (PRJNA501872)

Processing Status: Failed

General Details

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Sample Name GSM3450424
Organism Homo sapiens
Release Date 2/2019

Sample Links

Run Details

Spots 22530044
Total Bases 1126502200
Total Bases 1126502200

Repository Details

SRA SRR8135347
ENA SRR8135347
BioProject PRJNA501872

Experiment Details

Title HepG2 shSETD2 Ribo rep2 (Ribo-seq)

Sample Details

Run Accession SRR8135347
Total Number Of Spots (Original File)) 22530044
Total Number Of Bases (Original File) 1126502200
Average Read Length 50
Original File Size (Mb) 375
Experiment Id SRX4956363
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP167238
Pubmed Id 30867593
Sample SRS3997283
Biosample SAMN10347822
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3450424
Center Name GEO
Submission SRA800748
Month 2
Year 2019
Author Huang
Sample Source HepG2 cells
Sample Title HepG2 shSETD2 Ribo rep2 (Ribo-seq)
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Test
Inhibitor Cycloheximide
Tissue Liver
Cell-Line HepG2
Cellular-Compartment 80S monosome
Shrna shSETD2
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8135347 Homo sapiens HepG2 cells HepG2 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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