SRR8732207 (PRJNA527204)
Processing Status: Completed
General Details
| Sample Name | GSM3671687 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 8/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 20358650 |
|---|---|
| Total Bases | 1017932500 |
| Total Bases | 1017932500 |
Repository Details
| SRA | SRR8732207 |
|---|---|
| ENA | SRR8732207 |
| BioProject | PRJNA527204 |
Experiment Details
| Title | ribosome profiling PSEN_2 |
|---|
Sample Details
| Run Accession | SRR8732207 |
|---|---|
| Total Number Of Spots (Original File)) | 20358650 |
| Total Number Of Bases (Original File) | 1017932500 |
| Average Read Length | 50 |
| Original File Size (Mb) | 620 |
| Experiment Id | SRX5525069 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP188505 |
| Pubmed Id | 31416668 |
| Sample | SRS4491750 |
| Biosample | SAMN11130400 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM3671687 |
| Center Name | GEO |
| Submission | SRA860677 |
| Month | 8 |
| Year | 2019 |
| Author | Kwart |
| Sample Source | PSEN1 mutant iPSC-derived neurons |
| Sample Title | ribosome profiling PSEN_2 |
| Library-Type | Ribo-Seq |
| Condition | Mutant |
| Inhibitor | Cycloheximide |
| Timepoint | NA80 day old cortical neurons |
| Cell-Line | iPSC |
| Genotype | PSEN1 M146V/M146V |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8732207 | Homo sapiens | PSEN1 mutant iPSC-derived neurons | iPSC | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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