SRR8732208 (PRJNA527204)

Processing Status: Completed

General Details

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Sample Name GSM3671688
Organism Homo sapiens
Release Date 8/2019

Sample Links

Run Details

Spots 20652398
Total Bases 1032619900
Total Bases 1032619900

Repository Details

SRA SRR8732208
ENA SRR8732208
BioProject PRJNA527204

Experiment Details

Title ribosome profiling PSEN_3

Sample Details

Run Accession SRR8732208
Total Number Of Spots (Original File)) 20652398
Total Number Of Bases (Original File) 1032619900
Average Read Length 50
Original File Size (Mb) 625
Experiment Id SRX5525070
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP188505
Pubmed Id 31416668
Sample SRS4491751
Biosample SAMN11130427
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3671688
Center Name GEO
Submission SRA860677
Month 8
Year 2019
Author Kwart
Sample Source PSEN1 mutant iPSC-derived neurons
Sample Title ribosome profiling PSEN_3
Library-Type Ribo-Seq
Condition Mutant
Inhibitor Cycloheximide
Timepoint NA80 day old cortical neurons
Cell-Line iPSC
Genotype PSEN1 M146V/M146V
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8732208 Homo sapiens PSEN1 mutant iPSC-derived neurons iPSC Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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