SRR8732209 (PRJNA527204)
Processing Status: Completed
General Details
| Sample Name | GSM3671689 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 8/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 21629538 |
|---|---|
| Total Bases | 1081476900 |
| Total Bases | 1081476900 |
Repository Details
| SRA | SRR8732209 |
|---|---|
| ENA | SRR8732209 |
| BioProject | PRJNA527204 |
Experiment Details
| Title | ribosome profiling APP/PSEN1_1 |
|---|
Sample Details
| Run Accession | SRR8732209 |
|---|---|
| Total Number Of Spots (Original File)) | 21629538 |
| Total Number Of Bases (Original File) | 1081476900 |
| Average Read Length | 50 |
| Original File Size (Mb) | 654 |
| Experiment Id | SRX5525071 |
| Library Name | 0.0 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP188505 |
| Pubmed Id | 31416668 |
| Sample | SRS4491752 |
| Biosample | SAMN11130426 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM3671689 |
| Center Name | GEO |
| Submission | SRA860677 |
| Month | 8 |
| Year | 2019 |
| Author | Kwart |
| Sample Source | APP/PSEN1 double mutant iPSC-derived neurons |
| Sample Title | ribosome profiling APP/PSEN1_1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 0.0 |
| Condition | Wild Type |
| Inhibitor | Cycloheximide |
| Timepoint | NANANA_80 day old cortical neurons |
| Tissue | 0.0 |
| Cell-Line | iPSC |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | APP Swe/Swe; PSEN1 M146V/M146V |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8732209 | Homo sapiens | APP/PSEN1 double mutant iPSC-derived neurons | iPSC | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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