SRR931817 (PRJNA211752)
Processing Status: Completed
General Details
| Sample Name | GSM1184594 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 10/2013 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 127399109 |
|---|---|
| Total Bases | 3780789479 |
| Total Bases | 3780789479 |
Repository Details
| SRA | SRR931817 |
|---|---|
| ENA | SRR931817 |
| BioProject | PRJNA211752 |
Experiment Details
| Title | 1.5h_MM1S_20nM_bortezomib_ribosome_footprint |
|---|
Sample Details
| Run Accession | SRR931817 |
|---|---|
| Total Number Of Spots (Original File)) | 127399109 |
| Total Number Of Bases (Original File) | 3780789479 |
| Average Read Length | 29 |
| Original File Size (Mb) | 2724 |
| Experiment Id | SRX320146 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP027015 |
| Pubmed Id | 24171104 |
| Sample | SRS456536 |
| Biosample | SAMN02231210 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1184594 |
| Center Name | GEO |
| Submission | SRA092789 |
| Month | 10 |
| Year | 2013 |
| Author | Wiita |
| Sample Source | MM1.S myeloma cell line |
| Sample Title | 1.5h_MM1S_20nM_bortezomib_ribosome_footprint |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | 1.5h_NA |
| Tissue | Bone |
| Cell-Line | MM1S |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR931817 | Homo sapiens | MM1.S myeloma cell line | MM1S | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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