SRR9693979 (PRJNA553494)
Processing Status: Failed
General Details
| Sample Name | GSM3943974 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 51331766 |
|---|---|
| Total Bases | 6467802516 |
| Total Bases | 6467802516 |
Repository Details
| SRA | SRR9693979 |
|---|---|
| ENA | SRR9693979 |
| BioProject | PRJNA553494 |
Experiment Details
| Title | RiboSeq_ribosome_Aven_KO_rep1 |
|---|
Sample Details
| Run Accession | SRR9693979 |
|---|---|
| Total Number Of Spots (Original File)) | 51331766 |
| Total Number Of Bases (Original File) | 6467802516 |
| Average Read Length | 126 |
| Original File Size (Mb) | 2328 |
| Experiment Id | SRX6452244 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP213860 |
| Pubmed Id | 32048998 |
| Sample | SRS5105599 |
| Biosample | SAMN12285724 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM3943974 |
| Center Name | GEO |
| Submission | SRA918882 |
| Month | 2 |
| Year | 2020 |
| Author | Tuck |
| Sample Source | mouse embryonic stem cell |
| Sample Title | RiboSeq_ribosome_Aven_KO_rep1 |
| Library-Type | RNA-Seq |
| Replicate-Number | 1.0 |
| Condition | KO |
| Tissue | mouse embryonic stem cell |
| Genotype | Rosa26Cre-ERT2/BirA-V6 Skiv2l3xFLAG-Avi/3xFLAG-AviAven-/- |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR9693979 | Mus musculus | mouse embryonic stem cell | RNA-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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