Kim et al. 2019 (PRJNA382534)
General Details
| Title | Ribosome pausing at the AT-rich codons regulates the protein expression of secondary metabolite gene clusters in the Streptomyces tsukubaensis NRRL 18488 |
|---|---|
| Organism | |
| Number of Samples | 8 |
| Release Date | 2017/04/11 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
|---|---|
Repository Details
| SRA | SRP103795 |
|---|---|
| ENA | SRP103795 |
| GEO | GSE97637 |
| BioProject | PRJNA382534 |
Publication
| Title | |
|---|---|
| Authors | Kim W,Hwang S,Lee N,Lee Y,Cho S,Palsson B,Cho BK |
| Journal | Scientific data |
| Publication Date | 2020 May 8 |
| Abstract | |
| PMC | PMC7210306 |
| PMID | 32385251 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5443325 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq |  |
 |
 |
 |
|
|
||||
| SRR5443326 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| SRR5443327 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| SRR5443328 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| SRR5443329 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| SRR5443330 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| SRR5443331 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| SRR5443332 | PRJNA382534 | Streptomyces tsukubensis | Ribo-Seq | |
|
|
|
|
|
||||
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About