Dai et al. 2019 (PRJNA579549)

General Details

Title Ribosome profiling study of Miwi-null testes
Organism
Number of Samples 4
Release Date 2019/10/25 00:00
Sequencing Types
Protocol Details

Study Links

Repository Details

SRA SRP227006
ENA SRP227006
GEO GSE139399
BioProject PRJNA579549

Publication

Title
Authors Dai P,Wang X,Gou LT,Li ZT,Wen Z,Chen ZG,Hua MM,Zhong A,Wang L,Su H,Wan H,Qian K,Liao L,Li J,Tian B,Li D,Fu XD,Shi HJ,Zhou Y,Liu MF
Journal Cell
Publication Date 2019 Dec 12
Abstract Spermiogenesis is a highly orchestrated developmental process during which chromatin condensation decouples transcription from translation. Spermiogenic mRNAs are transcribed earlier and stored in a translationally inert state until needed for translation; however, it remains largely unclear how such repressed mRNAs become activated during spermiogenesis. We previously reported that the MIWI/piRNA machinery is responsible for mRNA elimination during late spermiogenesis in preparation for spermatozoa production. Here we unexpectedly discover that the same machinery is also responsible for activating translation of a subset of spermiogenic mRNAs to coordinate with morphological transformation into spermatozoa. Such action requires specific base-pairing interactions of piRNAs with target mRNAs in their 3' UTRs, which activates translation through coupling with cis-acting AU-rich elements to nucleate the formation of a MIWI/piRNA/eIF3f/HuR super-complex in a developmental stage-specific manner. These findings reveal a critical role of the piRNA system in translation activation, which we show is functionally required for spermatid development. Copyright © 2019 Elsevier Inc. All rights reserved.
PMC PMC8139323
PMID 31835033
DOI
Run Accession Study Accession Scientific Name Cell Line Library Type Treatment GWIPS-viz Trips-Viz Reads BAM BigWig (F) BigWig (R)
SRR10347714 PRJNA579549 Mus musculus Ribo-Seq
SRR10347715 PRJNA579549 Mus musculus Ribo-Seq
SRR10347716 PRJNA579549 Mus musculus Ribo-Seq
SRR10347717 PRJNA579549 Mus musculus Ribo-Seq
Run Accession Study Accession Scientific Name Cell Line Library Type Treatment GWIPS-viz Trips-Viz Reads BAM BigWig (F) BigWig (R)

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