Dai et al. 2019 (PRJNA579549)
General Details
Title | Ribosome profiling study of Miwi-null testes |
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Organism | |
Number of Samples | 4 |
Release Date | 2019/10/25 00:00 |
Sequencing Types | |
Protocol Details |
Study Links
GWIPS-viz | Trips-Viz |
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Repository Details
SRA | SRP227006 |
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ENA | SRP227006 |
GEO | GSE139399 |
BioProject | PRJNA579549 |
Publication
Title | |
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Authors | Dai P,Wang X,Gou LT,Li ZT,Wen Z,Chen ZG,Hua MM,Zhong A,Wang L,Su H,Wan H,Qian K,Liao L,Li J,Tian B,Li D,Fu XD,Shi HJ,Zhou Y,Liu MF |
Journal | Cell |
Publication Date | 2019 Dec 12 |
Abstract | Spermiogenesis is a highly orchestrated developmental process during which chromatin condensation decouples transcription from translation. Spermiogenic mRNAs are transcribed earlier and stored in a translationally inert state until needed for translation; however, it remains largely unclear how such repressed mRNAs become activated during spermiogenesis. We previously reported that the MIWI/piRNA machinery is responsible for mRNA elimination during late spermiogenesis in preparation for spermatozoa production. Here we unexpectedly discover that the same machinery is also responsible for activating translation of a subset of spermiogenic mRNAs to coordinate with morphological transformation into spermatozoa. Such action requires specific base-pairing interactions of piRNAs with target mRNAs in their 3' UTRs, which activates translation through coupling with cis-acting AU-rich elements to nucleate the formation of a MIWI/piRNA/eIF3f/HuR super-complex in a developmental stage-specific manner. These findings reveal a critical role of the piRNA system in translation activation, which we show is functionally required for spermatid development. Copyright © 2019 Elsevier Inc. All rights reserved. |
PMC | PMC8139323 |
PMID | 31835033 |
DOI |
Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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SRR10347714 | PRJNA579549 | Mus musculus | Ribo-Seq | ||||||||||
SRR10347715 | PRJNA579549 | Mus musculus | Ribo-Seq | ||||||||||
SRR10347716 | PRJNA579549 | Mus musculus | Ribo-Seq | ||||||||||
SRR10347717 | PRJNA579549 | Mus musculus | Ribo-Seq | ||||||||||
Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
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