Espah et al. 2020 (PRJNA640006)
General Details
| Title | Genetic circuit characterization by inferring RNA polymerase movement and ribosome usage |
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| Organism | |
| Number of Samples | 9 |
| Release Date | 2020/06/17 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
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Repository Details
| SRA | SRP267640 |
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| ENA | SRP267640 |
| GEO | GSE152664 |
| BioProject | PRJNA640006 |
Publication
| Title | |
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| Authors | Espah Borujeni A,Zhang J,Doosthosseini H,Nielsen AAK,Voigt CA |
| Journal | Nature communications |
| Publication Date | 2020 Oct 5 |
| Abstract | |
| PMC | PMC7536230 |
| PMID | 33020480 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR12513919 | PRJNA640006 | Escherichia coli | Ribo-Seq |  |
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| SRR12513920 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513921 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513922 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513923 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513924 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513925 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513926 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| SRR12513927 | PRJNA640006 | Escherichia coli | Ribo-Seq | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About