Holly et al. 2020 (PRJNA647736)

General Details

Title	Dissecting the source and contribution of non-canonical translation to the proteome and MHC class I immunopeptidome.
Organism
Number of Samples	12
Release Date	2020/07/22 00:00
Sequencing Types
Protocol Details

Study Links

GWIPS-viz	Trips-Viz

Repository Details

SRA	SRP273033
ENA	SRP273033
GEO	0.0
BioProject	PRJNA647736

Publication

Title
Authors	Vogel P, Beyer D, Holm C, Palberg T
Journal	Soft matter
Publication Date	2024 Nov 15
Abstract
PMC
PMID	None Available
DOI

	Run Accession	Study Accession	Scientific Name	Cell Line	Library Type	Treatment	GWIPS-viz	Trips-Viz	Reads	BAM	BigWig (F)	BigWig (R)
	SRR12285192	PRJNA647736	Homo sapiens	HBL1	Ribo-Seq	Cycloheximide
	SRR12285191	PRJNA647736	Homo sapiens	HBL1	Ribo-Seq	Cycloheximide
	SRR12285188	PRJNA647736	Homo sapiens	SUDHL4	Ribo-Seq	Harringtonine
	SRR12285187	PRJNA647736	Homo sapiens	SUDHL4	Ribo-Seq	Harringtonine
	SRR12285184	PRJNA647736	Homo sapiens	DoHH2	Ribo-Seq	Harringtonine
	SRR12285183	PRJNA647736	Homo sapiens	DoHH2	Ribo-Seq	Harringtonine
	SRR12285179	PRJNA647736	Homo sapiens	DoHH2	Ribo-Seq	Harringtonine
	SRR12285178	PRJNA647736	Homo sapiens	DoHH2	Ribo-Seq	Harringtonine
	SRR12285174	PRJNA647736	Homo sapiens	HBL1	Ribo-Seq	Harringtonine
	SRR12285173	PRJNA647736	Homo sapiens	HBL1	Ribo-Seq	Harringtonine
	SRR12285170	PRJNA647736	Homo sapiens	SUDHL4	Ribo-Seq	Cycloheximide
	SRR12285169	PRJNA647736	Homo sapiens	SUDHL4	Ribo-Seq	Cycloheximide
	Run Accession	Study Accession	Scientific Name	Cell Line	Library Type	Treatment	GWIPS-viz	Trips-Viz	Reads	BAM	BigWig (F)	BigWig (R)

ⓘ For more Information on the columns shown here see: About