Rak et al. 2021 (PRJNA694918)
General Details
| Title | Dynamic changes in tRNA modifications and abundance during T-cell activation [RNA/Ribo-seq] |
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| Organism | |
| Number of Samples | 8 |
| Release Date | 2021/01/26 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
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Repository Details
| SRA | SRP303322 |
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| ENA | SRP303322 |
| GEO | GSE165536 |
| BioProject | PRJNA694918 |
Publication
| Title | |
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| Authors | Rak R,Polonsky M,Eizenberg-Magar I,Mo Y,Sakaguchi Y,Mizrahi O,Nachshon A,Reich-Zeliger S,Stern-Ginossar N,Dahan O,Suzuki T,Friedman N,Pilpel Y |
| Journal | Proceedings of the National Academy of Sciences of the United States of America |
| Publication Date | 2021 Oct 19 |
| Abstract | |
| PMC | PMC8594584 |
| PMID | 34642250 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR13531014 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq |  |
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| SRR13531015 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| SRR13531016 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| SRR13531017 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| SRR13531018 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| SRR13566023 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| SRR13531020 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| SRR13531021 | PRJNA694918 | Mus musculus | CD4 T-cells | Ribo-Seq | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
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