0.0 et al. 2022 (PRJNA734953)
General Details
| Title | Charged tRNA profiling of mcf10a, HCC1806 cells, polysome profiling, RNA-Seq and Ribo-Seq in 4T07 cells upon LARS knockdown by shRNA, and RNA-Seq of ribosome-associated RNAs in Lars depleted PyMT tumors |
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| Organism | |
| Number of Samples | 7 |
| Release Date | 2021/06/03 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
|---|---|
Repository Details
| SRA | SRP322534 |
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| ENA | SRP322534 |
| GEO | GSE176130 |
| BioProject | PRJNA734953 |
Publication
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR14722557 | PRJNA734953 | Mus musculus | breast cancer cell lineNA | Ribo-Seq | 0.0 |  |
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| SRR14722558 | PRJNA734953 | Mus musculus | 0.0 | RiboTag | 0.0 | |
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| SRR14722559 | PRJNA734953 | Mus musculus | 0.0 | RiboTag | 0.0 | |
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| SRR14722560 | PRJNA734953 | Mus musculus | 0.0 | RiboTag | 0.0 | |
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| SRR14722561 | PRJNA734953 | Mus musculus | 0.0 | RiboTag | 0.0 | |
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| SRR14722562 | PRJNA734953 | Mus musculus | 0.0 | RiboTag | 0.0 | |
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| SRR14722563 | PRJNA734953 | Mus musculus | 0.0 | RiboTag | 0.0 | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
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