Wester et al. 2022 (PRJNA801467)
General Details
| Title | A Single-copy Knock In Translating Ribosome ImmunoPrecipitation (SKI TRIP) tool kit for tissue specific profiling of actively translated mRNAs in C. elegans. |
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| Organism | |
| Number of Samples | 21 |
| Release Date | 2022/01/28 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
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Repository Details
| SRA | SRP357164 |
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| ENA | SRP357164 |
| GEO | GSE195601 |
| BioProject | PRJNA801467 |
Publication
| Title | |
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| Authors | Wester LE,Lanjuin A,Bruckisch EHW,Perez-Matos MC,Stine PG,Heintz C,Denzel MS,Mair WB |
| Journal | Cell reports methods |
| Publication Date | 2023 Mar 27 |
| Abstract | |
| PMC | PMC10088236 |
| PMID | 37056370 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR17799078 | PRJNA801467 | Caenorhabditis elegans |  |
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| SRR17799077 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799076 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799072 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799071 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799070 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799066 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799065 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799064 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799060 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799059 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799058 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799054 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799053 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799052 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799048 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799047 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799046 | PRJNA801467 | Caenorhabditis elegans | |
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| SRR17799034 | PRJNA801467 | Caenorhabditis elegans | Ribo-Seq | |
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| SRR17799032 | PRJNA801467 | Caenorhabditis elegans | Ribo-Seq | |
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| SRR17799031 | PRJNA801467 | Caenorhabditis elegans | Ribo-Seq | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About