Chen et al. 2023 (PRJNA822806)

General Details

Title A parasitic fungus employs mutated eIF4A to survive on rocaglate-synthesizing Aglaia plants
Organism
Number of Samples 16
Release Date 2022/04/03 00:00
Sequencing Types
Protocol Details

Study Links

Repository Details

SRA SRP367330
ENA SRP367330
GEO
BioProject PRJNA822806

Publication

Title
Authors Chen M,Kumakura N,Saito H,Muller R,Nishimoto M,Mito M,Gan P,Ingolia NT,Shirasu K,Ito T,Shichino Y,Iwasaki S
Journal eLife
Publication Date 2023 Feb 28
Abstract Plants often generate secondary metabolites as defense mechanisms against parasites. Although some fungi may potentially overcome the barrier presented by antimicrobial compounds, only a limited number of examples and molecular mechanisms of resistance have been reported. Here, we found an Aglaia plant-parasitizing fungus that overcomes the toxicity of rocaglates, which are translation inhibitors synthesized by the plant, through an amino acid substitution in a eukaryotic translation initiation factor (eIF). De novo transcriptome assembly revealed that the fungus belongs to the Ophiocordyceps genus and that its eIF4A, a molecular target of rocaglates, harbors an amino acid substitution critical for rocaglate binding. Ribosome profiling harnessing a cucumber-infecting fungus, Colletotrichum orbiculare , demonstrated that the translational inhibitory effects of rocaglates were largely attenuated by the mutation found in the Aglaia parasite. The engineered C. orbiculare showed a survival advantage on cucumber plants with rocaglates. Our study exemplifies a plant-fungus tug-of-war centered on secondary metabolites produced by host plants. © 2023, Chen, Kumakura et al.
PMC PMC9977294
PMID 36852480
DOI
Run Accession Study Accession Scientific Name Cell Line Library Type Treatment GWIPS-viz Trips-Viz Reads BAM BigWig (F) BigWig (R)
SRR18590156 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590155 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590154 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590153 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590152 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590151 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590150 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590149 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590148 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590147 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590146 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590145 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590144 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590143 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590142 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
SRR18590141 PRJNA822806 Colletotrichum orbiculare Ribo-Seq
Run Accession Study Accession Scientific Name Cell Line Library Type Treatment GWIPS-viz Trips-Viz Reads BAM BigWig (F) BigWig (R)

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