Hsu et al. 2023 (PRJNA880902)
General Details
| Title | Ribosome dynamics following arginine deprivation in colon cancer cells |
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| Organism | |
| Number of Samples | 6 |
| Release Date | 2022/09/15 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
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Repository Details
| SRA | SRP397502 |
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| ENA | SRP397502 |
| GEO | GSE213472 |
| BioProject | PRJNA880902 |
Publication
| Title | |
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| Authors | Hsu DJ,Gao J,Yamaguchi N,Pinzaru A,Wu Q,Mandayam N,Liberti M,Heissel S,Alwaseem H,Tavazoie S,Tavazoie SF |
| Journal | Science advances |
| Publication Date | 2023 Jan 6 |
| Abstract | |
| PMC | PMC9821863 |
| PMID | 36608131 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR21595025 | PRJNA880902 | Homo sapiens | RKOcancer | Ribo-Seq |  |
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| SRR21595024 | PRJNA880902 | Homo sapiens | RKOcancer | Ribo-Seq | |
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| SRR21595023 | PRJNA880902 | Homo sapiens | RKOcancer | Ribo-Seq | |
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| SRR21595022 | PRJNA880902 | Homo sapiens | RKOcancer | Ribo-Seq | |
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| SRR21595021 | PRJNA880902 | Homo sapiens | RKOcancer | Ribo-Seq | |
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| SRR21595020 | PRJNA880902 | Homo sapiens | RKOcancer | Ribo-Seq | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
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