0.0 et al. 2023 (PRJNA913269)
General Details
Title | Human Hematopoietic Stem Cell Vulnerability to Ferroptosis [Ribosome profiling] |
---|---|
Organism | |
Number of Samples | 6 |
Release Date | 2022/12/16 00:00 |
Sequencing Types | |
Protocol Details |
Study Links
GWIPS-viz | Trips-Viz |
---|---|
Repository Details
SRA | SRP413563 |
---|---|
ENA | SRP413563 |
GEO | GSE221165 |
BioProject | PRJNA913269 |
Publication
Title | |
---|---|
Authors | Zhao J, Jia Y, Mahmut D, Deik AA, Jeanfavre S, Clish CB, Sankaran VG |
Journal | Cell |
Publication Date | 2023 Feb 16 |
Abstract | Hematopoietic stem cells (HSCs) have a number of unique physiologic adaptations that enable lifelong maintenance of blood cell production, including a highly regulated rate of protein synthesis. Yet, the precise vulnerabilities that arise from such adaptations have not been fully characterized. Here, inspired by a bone marrow failure disorder due to the loss of the histone deubiquitinase MYSM1, characterized by selectively disadvantaged HSCs, we show how reduced protein synthesis in HSCs results in increased ferroptosis. HSC maintenance can be fully rescued by blocking ferroptosis, despite no alteration in protein synthesis rates. Importantly, this selective vulnerability to ferroptosis not only underlies HSC loss in MYSM1 deficiency but also characterizes a broader liability of human HSCs. Increasing protein synthesis rates via MYSM1 overexpression makes HSCs less susceptible to ferroptosis, more broadly illustrating the selective vulnerabilities that arise in somatic stem cell populations as a result of physiologic adaptations. Copyright © 2023 The Author(s). Published by Elsevier Inc. All rights reserved. |
PMC | PMC9978939 |
PMID | 36803603 |
DOI |
Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRR22767490 | PRJNA913269 | Homo sapiens | NA_HSPC | Ribo-Seq | 0.0 | ||||||||
SRR22767489 | PRJNA913269 | Homo sapiens | NA_HSPC | Ribo-Seq | 0.0 | ||||||||
SRR22767488 | PRJNA913269 | Homo sapiens | NA_HSPC | Ribo-Seq | 0.0 | ||||||||
SRR22767487 | PRJNA913269 | Homo sapiens | NA_HSPC | Ribo-Seq | 0.0 | ||||||||
SRR22767486 | PRJNA913269 | Homo sapiens | NA_HSPC | Ribo-Seq | 0.0 | ||||||||
SRR22767485 | PRJNA913269 | Homo sapiens | NA_HSPC | Ribo-Seq | 0.0 | ||||||||
Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About