Zoschke et al. 2024 (PRJNA940452)

General Details

Title	Guidelines for performing Ribosome Profling in Plants Including Structural Analysis of rRNA fragments
Organism
Number of Samples	16
Release Date	2023/03/02 00:00
Sequencing Types
Protocol Details

Study Links

GWIPS-viz	Trips-Viz

Repository Details

SRA	SRP425357
ENA	SRP425357
GEO
BioProject	PRJNA940452

Publication

Title
Authors	Shen K,Cheng L,Xu C
Journal	Physical chemistry chemical physics : PCCP
Publication Date	2024 Oct 14
Abstract
PMC
PMID	None Available
DOI

	Run Accession	Study Accession	Scientific Name	Cell Line	Library Type	Treatment	GWIPS-viz	Trips-Viz	Reads	BAM	BigWig (F)	BigWig (R)
	SRR23689222	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689221	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689220	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689219	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689218	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689217	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689216	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689215	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689214	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689213	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689212	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689211	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR23689210	PRJNA940452	Nicotiana tabacum		Ribo-Seq
	SRR23689209	PRJNA940452	Nicotiana tabacum		Ribo-Seq
	SRR25180998	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	SRR25180997	PRJNA940452	Arabidopsis thaliana		Ribo-Seq
	Run Accession	Study Accession	Scientific Name	Cell Line	Library Type	Treatment	GWIPS-viz	Trips-Viz	Reads	BAM	BigWig (F)	BigWig (R)

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