Holmes et al. 2023 (PRJNA1017399)
General Details
| Title | Depletion of mRNA cap-binding protein eIF4E1 drives bradyzoite formation in Toxoplasma gondii [RIBO-seq] |
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| Organism | |
| Number of Samples | 6 |
| Release Date | 2023/09/14 00:00 |
| Sequencing Types | |
| Protocol Details |
Study Links
| GWIPS-viz | Trips-Viz |
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Repository Details
| SRA | SRP460544 |
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| ENA | SRP460544 |
| GEO | GSE243206 |
| BioProject | PRJNA1017399 |
Publication
| Title | |
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| Authors | Holmes MJ,Bastos MS,Dey V,Severo V,Wek RC,Sullivan WJ Jr |
| Journal | bioRxiv : the preprint server for biology |
| Publication Date | 2023 Oct 9 |
| Abstract | |
| PMC | PMC10592687 |
| PMID | 37873335 |
| DOI |
| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) | ||
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| SRR26060428 | PRJNA1017399 | Toxoplasma gondii | RH::TIR1 parental straintachyzoites |  |
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| SRR26060427 | PRJNA1017399 | Toxoplasma gondii | RH::TIR1 parental straintachyzoites | |
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| SRR26060426 | PRJNA1017399 | Toxoplasma gondii | RH::TIR1 parental straintachyzoites | |
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| SRR26060425 | PRJNA1017399 | Toxoplasma gondii | RH::TIR1 parental straintachyzoites | |
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| SRR26060424 | PRJNA1017399 | Toxoplasma gondii | RH::TIR1 parental straintachyzoites | |
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| SRR26060423 | PRJNA1017399 | Toxoplasma gondii | RH::TIR1 parental straintachyzoites | |
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| Run Accession | Study Accession | Scientific Name | Cell Line | Library Type | Treatment | GWIPS-viz | Trips-Viz | Reads | BAM | BigWig (F) | BigWig (R) |
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